About this Event
ATAC-seq, the gateway assay to epigenetics!
ATAC-Seq is a method to profile open chromatin regions genome-wide. Because of the assay’s speed, simplicity, and applicability to a wide range of sample types, ATAC-Seq has become a commonly-used epigenetic assay, and it can serve as a gateway to further, more detailed epigenetic analyses such as ChIP-seq, CUT&RUN or CUT&Tag
Ideal for:
Post-docs, RAs or grad students new to epigenetics research
Workshop Objectives:
- Hands on lab training and FREE sequencing of your own cells/tissue with Active Motif’s ATAC-Seq Kit (sponsored by the Center for Advanced Technology and Active Motif)
- In-depth protocol review highlighting challenging steps and how to overcome them, QC steps required, and trouble shooting scenarios.
- Data analysis training using ATAC-seq raw example data set so that you can analyze your own sample when FASTQ files are ready
Agenda:
9:00am - 1:00pm: Introduction lecture and wet lab (through library prep)
1:00pm - 2:00pm: Lunch Seminar on "Designing epigenetics projects using ATAC-Seq, ChIP-Seq, CUT&Tag & CUT&RUN" (Lunch will be provided).
2:00pm - 3:00pm: ATAC-seq raw data analysis bioinformatics presentation with example data set
Event Venue & Nearby Stays
Genentech Hall Room 227, 600 16th Street, San Francisco, United States
USD 0.00